Jul 3 2008
Contents
 
Introduction
Overview - RECOMMENDED READING FOR NEW ICM USERS
File Menu
Graphics Move Tools
Display Tab
Light Tab
Labels Tab
PDB Search Tab
Meshes Tab
View Menu
Selections
Tables
Local DB
Sequences
Bioinfo Menu
Tools Menu - Xray
 Crystallographic Neigbor
 Crystallographic Cell
 Biomolecule Generator
 Get Electron Density Map
 Map's Original cell
 Contour Electron Density Map
 Convert Xray Density to Grid
Tools Menu - 3D Predict
Tools Menu - Analysis
Tools Menu - Superimpose
Homology and Modelling
Working with Chemistry Tools
Chemsitry Menu
Docking
Ligand Editor
Animations, Slides, & Documents
ActiveICM
Movie Making
Frequently Asked Questions
Tutorial - Graphical Display
Molecular Document
Tutorial - Working with PDB Protein Structures
Tutorial - Working with Sequence Alignments
Tutorial - Ligand Binding Pocket Analysis
Tutorial - Homology and Modeling Tools
Tutorial - Crystallographic Analysis Tools
Tutorial - Working with Chemical Tables
Tutorial - Working with the Molecular Editor
Tutorial - Chemical Searching
Tutorial - Docking and Virtual Ligand Screening
 
Index
PrevICM User's Guide
16.7 Convert Xray Density to Grid		Next

For some applications such as trying to fit a structure to a density map you may want to extract a sub map and convert to a grid. You can do this by

  • First read into ICM a map (eg File/Open or Tools/X-ray/Get Electron Density Map)
  • Tools/X-ray/Convert Xray Density to Grid
  • Enter the map name or use the drop down list
  • Enter a grid size
  • Click OK

Prev
Contour Electron Density Map		Home
Up		Next
Crystallographic Neigbor

Copyright© 1989-2004, Molsoft,LLC - All Rights Reserved.
This document contains proprietary and confidential information of Molsoft, LLC.
The content of this document may not be disclosed to third parties, copied or duplicated in any form,
in whole or in part, without the prior written permission from Molsoft, LLC.