Aug 8 2008
Contents
 
Introduction
Overview - RECOMMENDED READING FOR NEW ICM USERS
File Menu
Graphics Move Tools
Display Tab
Light Tab
Labels Tab
 Custom Labels
 Displaying Distances
 (Un)display
PDB Search Tab
Meshes Tab
View Menu
Selections
Tables
Local DB
Sequences
Bioinfo Menu
Tools Menu - Xray
Tools Menu - 3D Predict
Tools Menu - Analysis
Tools Menu - Superimpose
Homology and Modelling
Working with Chemistry Tools
Chemsitry Menu
Docking
Ligand Editor
Animations, Slides, & Documents
ActiveICM
Movie Making
Frequently Asked Questions
Tutorial - Graphical Display
Molecular Document
Tutorial - Working with PDB Protein Structures
Tutorial - Working with Sequence Alignments
Tutorial - Ligand Binding Pocket Analysis
Tutorial - Homology and Modeling Tools
Tutorial - Crystallographic Analysis Tools
Tutorial - Working with Chemical Tables
Tutorial - Working with the Molecular Editor
Tutorial - Chemical Searching
Tutorial - Docking and Virtual Ligand Screening
 
Index
PrevICM User's Guide
7.2 Displaying Distances
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Within the labels tab there are tools for calculating and displaying distances. These tools can also be found in the Tools/Analysis menu.

{To display distance between two atoms:}

  • Click on the labels tab (previously called advanced tab).
  • Select the atoms between which you would like to find the distance. (See selection toolbar)
  • Click on the 'Show Distances Between Two Atoms' Button
  • The distance will be displayed in angstroms, in green.

{To find the distance from one atom to many:}

  • Click on the labels tab (previously called advanced tab).
  • Select the atom from which you wish to measure the distance from (See selection toolbar)
  • Click on the 'Show Distances From One Atom To Many' button.
  • The distances will be displayed in green.

The maximal and minimal distances can be selected by entering values in the boxes shown here (below) in the labels tab (previously called Advanced tab).

NOTE: Distances can be displayed and undisplayed in the meshes section of the ICM Worskapce. There are also a wide variety of tools available if you right click on the distance in the ICM Workspace - see image below.


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