ICM-Browser User Guide

Version: ICM-Browser 3.7 Last Updated: 04/08/2010

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Getting Started: Download and Install ICM-Browser and ActiveICM.
Download ICM-Browser Distribution.	Download
Install ICM-Browser.	Windows Linux Mac
Download ActiveICM Distribution.	Download
Install ActiveICM.	Windows Linux Mac
Creating Slides How to Create a Series of Fully-Interactive 3D Slides.
How to Make Fully Interactive 3D Slides	HTML GUI Manual
How to Animate Slides	HTML GUI Manual
How to View and Navigate Slides in the ICM-Browser.	HTML GUI Manual
How to Edit Slides.	HTML GUI Manual
How to Add Smooth Blending and Transition Effects Between Slides.	HTML GUI Manual
How to Create Molecular Documents: Linking Slides to HTML Text.
How to Create an HTML Document.	HTML GUI Manual
How to Edit an HTML Document.	HTML GUI Manual
How to Make a Hyperlink Between HTML Text and a Slide.	HTML GUI Manual
How to Display Molecular Documents in PowerPoint
How to Embed in Microsoft PowerPoint 2003	HTML GUI Manual
How to Embed in Microsoft PowerPoint 2007	HTML GUI Manual
How to Use ActiveICM in PowerPoint	HTML GUI Manual
How to Change ActiveICM Component Properties in PowerPoint	HTML GUI Manual
Advanced use of ActiveICM: Macros to direct visualisation changes.	HTML GUI Manual
How to Display Molecular Documents in Web Browsers
How to Display Molecular Documents in Web Browsers	HTML GUI Manual
How to use the Graphical Display
How to load a PDB structure.	HTML GUI Manual
How to Move a Structure in the Graphical Display.	HTML GUI Manual
How to use the Graphics window controls.	HTML GUI Manual
How to Make Selections.	HTML GUI Manual
How to Change the Selection Level and Mode.	HTML GUI Manual
How to Check What is Selected.	HTML GUI Manual
How to use the ICM Workspace Panel	HTML GUI Manual
How to Display a Molecule.	HTML GUI Manual
How to Change Protein Representation.	HTML GUI Manual
How to remove chain breaks (dotted lines).	HTML GUI Manual
How to Color.	HTML GUI Manual
How to Display a Binding Pocket Surface	HTML GUI Manual
How to (Un)Display Hydrogens.	HTML GUI Manual
How to Save an ICM Object.	HTML GUI Manual
How to Save an ICM Project File.	HTML GUI Manual
How to Drag and Drop.	HTML GUI Manual
How to: Right Click Options.	HTML GUI Manual
How to Move Windows.	HTML GUI Manual
How to Arrange Windows	HTML GUI Manual
How to change Graphics Effects
How to display the FOG effect.	HTML GUI Manual
How to display side-by-side stereo.	HTML GUI Manual
How to toggle full screen mode.	HTML GUI Manual
How to adjust perspective.	HTML GUI Manual
How to change the lighting.	HTML GUI Manual
How to display sketch accents.	HTML GUI Manual
How to display elegant ribbon and ligand sketch.	HTML GUI Manual
How to add Labels and Annotations
How to Label Residues.	HTML GUI Manual
How to Label Atoms.	HTML GUI Manual
How to Label Variables.	HTML GUI Manual
How to Display and Undisplay Sites.	HTML GUI Manual
How to Make and Display Annotations.	HTML GUI Manual
How to Make and Display 2D and 3D Labels.	HTML GUI Manual
Convert Protein, Display Hydrogens and Ligand Binding Pocket.
How to Convert a PDB Structure into an ICM Object.	HTML GUI Manual
How to Display Ligand Binding Pocket.	HTML GUI Manual
How to Make High Quality Publication Images
How to Toggle High Quality Display	HTML GUI Manual
How to Toggle Antialiasing.	HTML GUI Manual
How to Copy Image to ClipBoard	HTML GUI Manual
How to Write an Image.	HTML GUI Manual
How to Use the Advanced Write Image Options.	HTML GUI Manual
How to Add an Image to the ICM Photo Album.	HTML GUI Manual
How to Superimpose Protein Structures.
How to Superimpose One or More Protein Structures.	HTML GUI Manual
How to Measure Distances and Angles.
How to Measure Distances Between Two Atoms.	HTML GUI Manual
How to Measure Distances From One Atom to Many.	HTML GUI Manual
How to Show Corresponding Distances in Two Objects.	HTML GUI Manual
How to Display the Ruler Bar.	HTML GUI Manual

Creating 3D Documents Is Straightforward

For written documentation please see the ActiveICM User Guide and the ICM-Browser User Guide. Please see the videos below for a guide to generating fully-interactive 3D molecular files in PowerPoing and on the Web.

How to Download and Install ICM-Browser	How to Download and Install AvtiveICM
How to Generate a Series of Fully-Interactive 3D Slides	How to Add Hyperlinked HTML Text to a 3D Document File
How to Embed Fully-Interactive 3D Documents into a PowerPoint File	How to Embed Fully-Interactive 3D Documents into a Web Browser