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ICM Browser Pro


Download

*Install the free ICM-Browser

Platforms

Windows, Mac, and Linux

Key Features

All the tools in ICM-Browser, Molecular Movies, Sequence and Alignment Annotation, Structure Analysis, Crystallographic Analysis, Surfaces, Shadows, Multiple Superposition More...

Features

All the Features in ICM-Browser. ICM-Browsers-Pro includes all the features in ICM-Browser . Including the ability to display ligand binding pocket surfaces, convert to an icm object, optimize hydrogens, display surfaces, powerful PDB search engine, superimpose protein structures and measure angles and distances. More...
Movie Making Made Easy. ICM-Browser-Pro enables you to make molecular movies by dumping whatever is displayed on the screen into a *.mpeg, *.avi or *.mov file. You can pause and change the scene and include beautiful transitions from one position to another. More...
Structure Analysis Tools. Calculate protein contact areas, closed cavities, surface area, display distances and angles, display fully-interactive Ramachandran plots, superimpose multiple structures... More...
Crystallographic Analysis Tools. A number of crystallographic analysis tools are available including a direct link to the electron density map repository, contour the map of the whole molecule, generate crystallographic cell, neighbors and biomolecules. More...
Surfaces Display surfaces colored by binding properties and electrostatics. Edit surfaces/meshes and export as wavefront object. More...
Sequence and Alignment Tools. Read and display sequences and alignments, extract sequences from 3D structure, multiple coloring of the alignment, sequence and alignment annotation and connection with the 3D structure. More...
Shadows. Display and save images with high quality shadow representations.
Connect to Object and Move Independently. Connect selected molecules to the mouse for independent rotation (by the LeftMouseButton) and translation (MiddleMouseButton) with respect to the original coordinate frame.
Automated Protein Secondary Structure Assignment. If the secondary structure string is not specified, apply ICM modification of the DSSP algorithm of automatic secondary structure assignment (Kabsch and Sander, 1983) based on the observed pattern of hydrogen bonds in a three dimensional structure.
Superimpose Multiple Protein Structures. Superimpose by specific interatomic pairs, by 3D, by aligned residues, residue number or exact match. Define atom selection for superposition. More...
Plotting Tools. Make fully interactive colorful X-Y plots and histograms with up to 4 dimensions. More...

Minimum Recommended Hardware Specifications

See the Minimum Recommended Hardware Specifications required to run the ICM-Browser-Pro software.

Extending the ICM Browser Pro environment

ICM-Pro

ICM Pro is a superset which includes ICM-Browser Pro as a part. In addition ICM Pro contains tools for structure prediction, docking, mutation modeling, electrostatic calculations, energy calculations, structure annotation and function prediction such as ligand pockets, protein interfaces, compound properties, alignment building and editing, mathematical modeling.

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