ICM User's Guide: Getting Started

ICM GUI Manual

ICM Manual v.3.9

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Introduction
Help Videos
Reference Guide
Getting Started
Protein Structure
Molecular Graphics
Slides & ActiveICM
Sequences & Alignments
Protein Modeling
Cheminformatics
Learn and Predict
Docking
Virtual Screening
Molecular Dynamics
MolScreen
3D Ligand Editor
Tables and Plots
Local Databases
ICM-Scarab
KNIME
Tutorials
FAQs

Index

4 Getting Started

4.1 The Components of the GUI
4.2 How to load a PDB Structure
4.3 How to Move a Molecule in the Graphical Display
4.4 How to Display Molecules using the ICM Workspace Panel
4.5 ICM Selections
4.6 How to Change Molecule Representation
4.7 How to Color Molecules
4.8 How to Display a Binding Pocket Surface
4.9 How to Save an ICM Object
4.10 How to Save an ICM Project File
4.11 How to Drag and Drop
4.12 How to: Right Click Options
4.13 How to Move Windows
4.14 How to Make Images
4.15 How to search and download Protein Structure, Sequences, and Chemicals
4.16 Create New Objects
4.17 Open and Read Files
4.18 Saving Files
4.19 Preferences

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