[ Download | Graphics | Structure Analysis | Surfaces | Superimpose Proteins | Crystallographic Tools | Sequence Analysis | Plots ]
| NOTE: ICM-Browser-Pro contains all the features in ICM-Browser. Click here for the ICM-Browser Reference Guide. |
| Getting Started: Download and Install ICM-Browser-Pro | |
| Download ICM-Browser-Pro Distribution. | Download |
| Install ICM-Browser-Pro. | Windows Linux Mac |
| Graphics and Movie Making | |
| How to generate the shadow effect. | HTML GUI Manual |
| How to make a screenshot movie. | HTML GUI Manual |
| How to make a movie from a set of slides. | HTML GUI Manual |
| How to move a molecule independently of the other display objects (Connect). | HTML GUI Manual |
| Protein Structure Analysis | |
| How to calculate contact areas between molecules. | HTML GUI Manual |
| How to identify closed cavities. | HTML GUI Manual |
| How to calculate surface area. | HTML GUI Manual |
| How to generate interactive Ramachandran plots. | HTML GUI Manual |
| Surfaces | |
| How to generate electrostatic and binding property surfaces. | HTML GUI Manual |
| How to connect and rotate/translate surface (mesh). | HTML GUI Manual |
| How to crop a mesh/surface. | HTML GUI Manual |
| How to save a mesh/surface. | HTML GUI Manual |
| Superimpose Proteins | |
| How to superimpose proteins based on 3D by visible atoms, C-alpha, backbone or heavy atoms. | HTML GUI Manual |
| How to superimpose multiple proteins based on aligned residues.. | HTML GUI Manual |
| Crystallographic Tools | |
| How to contour electron density. | HTML GUI Manual |
| How to display crystallographic cell. | HTML GUI Manual |
| How to display crystallographic symmetry. | HTML GUI Manual |
| How to convert x-ray density to a grid. | HTML GUI Manual |
| Sequence Analysis | |
| How to annotate an alignment - box and shade. | HTML GUI Manual |
| How to annotate an alignment with text. | HTML GUI Manual |
| How to display secondary structure in an alignment. | HTML GUI Manual |
| How to extract sequences from pdb files. | HTML GUI Manual |
| How to assign secondary structure. | HTML GUI Manual |
| How to link sequence, alignments, and structures. | HTML GUI Manual |
| How to save as image, print, and delete sequences and alignments. | HTML GUI Manual |
| Plotting Tools | |
| Make fully interactive colorful X-Y plots and histograms with up to 4 dimensions. | HTML GUI Manual |
| Save plot and histogram as image. | HTML GUI Manual |